BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G02SP1|AL429447
(737 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 1349 0.0
>3x_Contig1538
Length = 9120
Score = 1349 bits (664), Expect = 0.0
Identities = 702/732 (95%), Gaps = 1/732 (0%)
Strand = Plus / Plus
Query: 6 catgtcagcagatgccttctctgtagttatttgaggagatttatgaatatmttgtttgtt 65
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6981 catgtcagcagatgccttctctgtagttatttgaggagatttatgaatatcttgtttgtt 7040
Query: 66 tgcmgtttmmtmtmtgtatmgcagtttctcgaggacagattamgctgggaamggctttaa 125
||| |||| | | |||| |||||||||||||||||||||| |||||||| ||||||||
Sbjct: 7041 tgccgtttcctctctgta-cgcagtttctcgaggacagattacgctgggaacggctttaa 7099
Query: 126 magaammtgctaattagtttamtattamatamtamatgaggtgtcamatgamatgcgtca 185
|||| |||||||||||||| ||||| ||| || ||||||||||| |||| ||||||||
Sbjct: 7100 cagaacctgctaattagtttactattacatactacatgaggtgtcacatgacatgcgtca 7159
Query: 186 agggccgatataaagtatctagttagagaggtatamccgagccgaaagagctttttttcg 245
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7160 agggccgatataaagtatctagttagagaggtatacccgagccgaaagagctttttttcg 7219
Query: 246 tatgggggctatgcaaacmtgatttcaggatggtagtagtatgtacagttgaaataggat 305
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 7220 tatgggggctatgcaaacctgatttcaggatggtagtagtatgtacagttgaaataggat 7279
Query: 306 ctcttgamgtcgttccaatttggtaaggtcctcaagtttatcacttggtatctacattcc 365
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7280 ctcttgacgtcgttccaatttggtaaggtcctcaagtttatcacttggtatctacattcc 7339
Query: 366 atgccataatttgctacgtctagctctactatcttacgataaacgtcgtaacaaacgggt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7340 atgccataatttgctacgtctagctctactatcttacgataaacgtcgtaacaaacgggt 7399
Query: 426 ctatcagcccccaatccgttaaagaacgaaaacgtaccctctggtttcagtagtccgaca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7400 ctatcagcccccaatccgttaaagaacgaaaacgtaccctctggtttcagtagtccgaca 7459
Query: 486 atcacgtcgtacaagtccagcanatcttggtaatgttcactgaacgnatcgtaatatatg 545
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 7460 atcacgtcgtacaagtccagcatatcttggtaatgttcactgaacgtatcgtaatatatg 7519
Query: 546 ccgtcgaaaaamamttctccttgatccaaaagttcgtttagacgagattgccatctaccc 605
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7520 ccgtcgaaaaacacttctccttgatccaaaagttcgtttagacgagattgccatctaccc 7579
Query: 606 tcgagtataacaacgttttctttatcgaaccaamcagtttycttcattttggccagtwcg 665
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 7580 tcgagtataacaacgttttctttatcgaaccaaccagtttccttcattttggccagtacg 7639
Query: 666 tctggatgggcttcacagatgtagtgtttggtcactttctcatcctggatgaaattgtct 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7640 tctggatgggcttcacagatgtagtgtttggtcactttctcatcctggatgaaattgtct 7699
Query: 726 atgatccmcata 737
||||||| ||||
Sbjct: 7700 atgatccccata 7711
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2911
Number of Sequences: 1807
Number of extensions: 2911
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 737
length of database: 10,358,551
effective HSP length: 16
effective length of query: 721
effective length of database: 10,329,639
effective search space: 7447669719
effective search space used: 7447669719
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)